11. Synchrotron Infrared Microspectrometry
N. Guilhaumou*(1),
P . Dumas (2), J. Ingrin (4)
Abstract
Progress in petrography over the last few decades has made it clear that most rock formation and subsequent transformation involves the fluid phase. Whether the fluid is a silicate magma, a water solution and/or a mixture of a gas or hydrocarbon, a fluid will be implicated in the chemical processes and in mineral crystallisation and its transformation. It now seems that CO2+H2O are crucial in the mechanism of magmatic fractionation during the evolution of the earth's mantel. Hence the challenge exists for contemporary petrologists to analyse minerals at the micron level and to search for evidence of fluids. Using microspectroscopy on unmounted doubly polished thin sections, molecular maps can be made that can be directly correlated with the familiar optical petrographic views. Clearly microspectroscopy is particularly attractive because it is non-destructive and where included fluids are seen, does not disturb the overall structure. Mid infrared is capable of providing highly specific fingerprints of molecular vibrations in the range 600-4000cm-1 in most mineral specimens [1,2]. If the infrared radiation is focussed into samples through an i.r. microscope molecular structural mapping is feasible [3]. However until recently, the classical i.r. microscope and spectrometer allows us to resolve down only to the diffraction limit - in practice to ~20 micrometers [4]. This limitation drastically restricts the application of the method to petrography and particularly so in the study of hydrocarbon inclusions which are frequently of a size less than 10 microns diameter in reservoir cements [5]. Finer resolutions can be obtained if Synchrotron infrared sources are used to illuminate the microscope in a confocal arrangement. To test the application of this technique in the study of petroleum migration, organic species have been analysed inside fluorite matrix and diagenetic quartz removed from petroleum reservoirs. Further, the sensitivity of infrared methods in detecting CO2 + hydroxyl groups (both ÒH and bonded H2O) has enabled us to detect these fragments in naturally quenched glasses within basalts [6] and even to estimate from concentration profiles, diffusion coefficients of OH groups in minerals normally considered to be anhydrous e.g., pyroxene and olivine [7,8]. These preliminary results demonstrate great potential for further developments in the petrography of petroleum bearing occurrences [9]. Instrumentation and Analytical conditions
Instrumentation Experiments were carried out on the U2B beamline
at the National Synchrotron Light Source of the Brookhaven National
Laboratories in Upton NY, USA. An FTIR infrared micro-spectrometer
(Irµs by Spectra Tech)
is interfaced to the synchrotron beam [10-13]. The optical system
includes an optical module so that the user can identify the zone
wherein the spectrum being recorded. An introduction to micro-infrared
spectrometry has appeared recently in ijvs [Volume
2, Edition 4]. These advantages are reflected in a considerable increase in the S:N ratio in the recorded spectra. Using a 3 micrometer aperture the advantage is ~x35. The infrared beam is handled using Cassegrain mirror optics X 15 (again see Figure 1) and signal is recorded using a mercury-cadmium-telluride detector. A colour CCD camera captures a visible image of the specimen
enabling us to identify the inclusions under investigation. An automated X-Y mapping stage
permits us to scan specimens with a step size accuracy and reproducibility of 1µm. The objective and condenser of the confocal
arrangement were both of the Schwarzschild Reflection type. To minimise atmospheric
absorption (due to water vapour and CO2) the entire system can be purged
throughout using dry nitrogen.
Sampling It was found that a 3 x 3 micrometre aperture was the most appropriate providing excellent spectra with good S:N ratios. Spectra were recorded at 4cm-1 resolution over 256 co-added scans (requiring a total sampling time of about 110 seconds). Triangular apodization was adopted throughout. Mapping was achieved using a raster of spectra with a separation of 2 and 3 micrometers. Each spectrum is baseline subtracted to account for the intensity decrease of the of the beam during each photons injection. Where measurement were made on the OH moieties in the mineral specimens, doubly polished pieces of mineral nearly 1mm thick were mounted over a hole and spectra were recorded as above but with a 10 x 10 micrometre aperture. Results and discussion The analysis of the various different inclusions we encounter in minerals has yielded a rich source of information. We have focussed our attention on three main issues.
Hydrocarbon fluid inclusions in sedimentary settings have been successfully analysed using FTIR microspectroscopy in fluorite and quartz cements and has been related to petroleum migration [15,17]. In silicaceous diagenetic overgrowths, these inclusions are generally less than 10 micrometres in diameter [5]. The oil content of such inclusions is hard to identify but UV fluorescence microscopy is sometimes valuable. On the other hand detecting the presence of water is very difficult as it frequently wets the cavity walls and is simply not visualised by optical microscopy [15,16].The presence of volatiles is important in providing evidence on the formation of organic matter. Components such as dissolved CO2, N2 and SO2 are significant but their presence in an oil inclusion cannot be detected optically. For the larger inclusions where an infrared fingerprint for oil can be recorded the analysis may be incomplete e.g. aromatic C-H stretching modes have low extinction coefficients hence the detection and quantitation of the aromatic content and distribution are problematic. Unfortunately the location and identification of such species in inclusions are of prime importance for the definition of the overall fluid system [4]. We show below that we have now succeeded in locating and identifying such compounds in fluid inclusions smaller than 20 micrometres. The occurrence of both petroleum and aqueous fluid inclusions (FI) in siliceous overgrowths from North Sea reservoir sandstone (from the Dunbar area) have been studied previously [18,19]. Two generation of aqueous and organic inclusions were described. The first one (GI) is at the limit between detrital grains and siliceous overgrowths whilst the second one (GII) lie within detrital grains [18]. In GI most of the inclusions are small and less than 10 micrometres in size. In GII the inclusions are sized between 10 and 20 micrometres and are brown in colour. [19] We have performed synchrotron microspectrometric examinations on various inclusions of both types above. We have obtained very precise differentiations within class GI between organic and aqueous fluid containing inclusions and have done so with very high S:N ratios. In all cases the atmosphere has been used as a background because of the possible heterogeneity of the quartz matrix (presence of inframicroscopic fluid inclusions). The low frequency cut off near 2000cm-1 and the bands at 2133 and 2237cm-1 are due to the quartz itself. The weak and broad features near 2332 and 2372cm-1 are due to atmospheric CO2 and arise from variations in the efficiency of purging. Two types of infrared spectra on inclusions can be recorded. The
first type is illustrated in Figure 2 a to d , the second in Figure 3 a to c.
The first type shows a main band centred around 3400cm-1 due to molecular water entrapped inside the inclusions [20-21]. The amount of water varies from inclusion to inclusion. A weak but sharp feature also occurs near 3382cm-1. Its sharpness cannot be associated with molecular water but it can be due to OH groups bonded within quartz [22]. Other inclusions exhibit a broad intense absorption between 2800 and 3100cm-1. The bands seen in Figures 2 and 3 near 2960 and 2875cm-1 are due to the asymmetric and symmetric CH stretching modes in CH3 fragments while those at 2925 and 2850cm-1 are due to related motions in CH2 groups [20-21]. The relative intensity of the CH3 and CH2
characteristics can be used to estimate very approximately the chain length of the
aliphatic hydrocarbons. These are estimated to lie in the range C6H14
and C10H22 [16]. A small feature near 3030cm-1 can
sometimes be seen although it is very weak. This band might originate from CH4
or aromatics. Methane has been seen in FI inclusions similar to ours using Raman methods
[18,19]. The appropriate peak is normally expected to occur near 3010cm-1.
Although it is located at higher frequencies 3030cm-1 in the Raman
measurements. We therefore propose as a result that the band we observe is of aromatic
origin. Carbon dioxide occurs both in the inclusions and in the atmosphere and as a result
incomplete purging of the optical path causes confusion. Making appropriate corrections we
estimate that the partial pressure of CO2 in the inclusions is around 1
atmosphere.
In the second generation of specimens GII we note two types of inclusion:
The CO2 absorbs at 2338cm-1 suggesting it is associated with oil as a dissolved component. We estimate the aliphatic hydrocarbons have chain lengths between C8 and C12 and are free of significant aromatic fraction. Two formations have been sampled in a sandstone reservoir which
presumably have a different geological history from those considered above. In these cases
organic fluid inclusions are yellow-brown and are included in quartz overgrowths. Ten out
of twenty inclusions in each sample were analysed in the two formations. The
characteristic CH stretching bands of aliphatic hydrocarbons and a very strong absorption
due to molecular water are seen in Figure 4. The sharp feature near 2337cm-1 in
Figure 4b is due to CO2 inside fluid inclusion.
We estimate from the CH2 and CH3 bands in Figure 4b a chain length between C7 and C9. Methane is not detected. In Figure 4a a marked feature above 3040cm-1 appears due to aromatics but CO2 is not detected. The absorption band pattern in Figure 4a around 2900cm-1 suggests to us that the hydrocarbons are of low molecular weight. We also note narrow peaks at 3620 and 3690 characteristic of hydroxyl groups. Now, they do not appear in Figure 4b so perhaps the OH groups are associated with the aromatic components or of course the aliphatic ones. We suggest that the two very different inclusions must be associated with two differing stages in oil maturation. Quantitative analysis Semiquantitaive analyses can be performed exhibiting the change in the integrated intensities of each vibrator inside the fluid inclusions. We have performed such analyses on two different inclusions in fluorite and in quartz in which at room temperature the fluid is undercritical i.e. both a liquid and a vapour phase are present. We first focused on the CO2, water, aliphatic and aromatic vibrational bands. In Figure. 5, we report infrared spectra of typical hydrocarbon entrapped fluid inclusions A and B, taken with a small aperture (3x3 micrometres). The presence of CO2 under pressure, with its characteristic peak at 2338 cm-1 is clearly in evidence in A, as well as the presence of aliphatic components. Hydroxyl groups are also seen at 3592 and 3697 cm-1. We then scanned the inclusion, in a raster fashion (using 3 micrometre steps), in order to record the chemical mapping of the inclusion. We report the image of the chemical composition of the aliphatic compounds, CO2 and the hydroxyl groups (at 3697 cm-1). It is clearly seen that the CO2 is positioned mainly in the vapour phase whilst aliphatics are mainly confined to the liquid. However, an interesting observation is the chemical image of the hydroxyl which match exactly that of the aliphatic compounds. This encourages us in our initial hypothesis that the OH groups form the end groups terminating in the aliphatic compounds, and should motivate further studies to understand the precise chemical nature of these compounds entrapped inside inclusions. In inclusion B typical spectra show aliphatic and aromatic species (band centred at 3030 cm-1) again allowing us to scan the chemical map of their distribution inside mineral. The quantitative aspect of our analysis of chemical compounds inside fluid inclusions is relevant if one needs to address questions regarding the volume occupied by each chemical compound within an inclusion. However, this type of study is quite difficult. This issue is important in geological analysis, and we want to detail this particular aspect. One of the properties of IR spectroscopy, is to drawn a linear
relationship between the intensity of an absorption band (expressed in absorbance units)
and the product of concentration and thickness, for a given vibrator [20-21]. In infrared
microspectrometry at and under the diffraction limit one attempts to match the optical
image (determined by the size of the projected aperture) and the chemical image. The IR
wavelength is of the same order or less than the size of the aperture, hence diffraction
effects tend to broaden significantly the projected IR image at the sample stage (Airy
diffraction pattern). To reduce this effect and keep a constant lateral resolution for all
wavelength recorded, a confocal objective is used (the confocal objective is referred to
below as the 'condenser'). The objective and condenser must be optically conjugated. When
a medium is present above and below the inclusion, refraction has to be taken into account
in order to keep the objective and condenser conjugated. When achieved, this remains true
unless the local shape of the inclusions change, the thickness of the upper and/or lower
medium vary, and/or the refractive index of the medium through which the infrared beam
propagates does not vary with wavelength. In such a case, the infrared lateral resolution
departs from the optical resolution. None of these parameters can be kept under control
from one sample to the other, hence errors in quantitation are inevitable. As a
consequence, particular caution has to be taken when attempting to extract volume
measurements from confocal microscopy in the infrared region.
Volatiles characterization in magmatic process
Hydrogen profile in anhydrous minerals
The diffusion rate of point
defects associated with hydrogen storage in anhydrous minerals like pyroxenes, olivine or
garnet (mainly metal vacancies in octahedral sites: VMe) is thought to play a
prominent part in the kinetics of hydrogen exchange within the Earths upper mantle
[25,26]. Among these minerals, diopside is regarded as the most hydrogen-rich within the
mantle beneath 410 Km depth (minerals are uplifted during volcanic eruptions) [8]Bell and
Rossman, 1992; [27]. Due to the slow self-diffusion of major elements in diopside compared
with olivine[28, 29], the diffusion coefficient of the associated point defects in
diopside are expected to be significantly lower than those in olivine (coefficient DVMe
olivine In order to measure the mobility of the intrinsic point defects involved in the uptake of hydrogen at 1200°C, we have performed the following experiment on a gem quality Russian diopside (Figure 7):
Figure 8, shows a typical infrared spectrum, collected on the pre-annealed sample in the 3000-4000 cm-1 frequency region. The hydroxyl peak, at 3648 cm-1, is clearly seen, and its intensity variation has been accurately followed, when stepping from the edge of the two crystals towards the centre (Figure 9). The pre-annealed piece has a hydrogen concentration more than twice that of the hydrogen concentration within the reference piece (labeled XIII-2) and shows a really significant concentration profile. The profile decreasing from the edge toward the centre of the crystal has been estimated and curve fitted assuming an isotropic diffusion in three directions within the sample (Figure 9 see equations in Ref. 30.). Our measured value of the diffusion coefficient at 1200°C, 5±2 x10-13 m2s-1 is more than 20 times smaller than the diffusion coefficient of VMe in San Carlos olivine crystals [26]. It suggests that the diopside equilibration with water within the upper mantle is slower than it is in olivine.
These first results acquired, using synchrotron infrared microspectrometry on a range of samples of geological interest clearly demonstrate that detailed chemical analysis inside small (micron size) inclusions are now feasible, with a high infrared contrast, and therefore open up a range of new investigation domains in geology. For instance, the characterisation of diagenetic processes, particularly useful for reconstitution of palaeofluid evolution in the history of petroleum reservoirs is now possible. A typical example of the application of our methods concern North Sea samples from Dunbar region sandstones. Two oil generations can be differentiated between detrital grains and those derived from in overgrowth zones, suggesting that one of them was formed by refilling of old cavities inside detrital grains and the other one at the beginning of siliceous overgrowth formation [9,19]. Additionally, the heterogeneity of the fluid responsible for the main episode silicification has been clearly evidenced from successive FTIR spectra. In a second example, where a tectonically emplaced reservoir is implicated, the presence of aromatics and dissolved CO2 is identified and considered. Two different oil imprint are identified vis. the differentiation of the maturation level of the oil entrapped during it's tectonic history. The CO2 in the vapour phase as well as that dissolved in organic liquids or in the vitreous part of a glass melt fluid inclusion is detected down to a spatial resolution of 3x3 µm2 in low density fluids (< 2 mole %) thanks to the low detection limits and the almost complete purge of the system. The detection of liquid or pressurised vapour water, aliphatic and aromatic components within an inclusion is precise and although as we have explained, of limited quantitative reliability and value, does supply invaluable data on domains less than 10 micrometres in diameter. Semi quantitative viewing aims to better understand re-partition of the chemical species between liquid and vapor (undercritical) in the cavities and to specify possible oxygenated bonds. The H2O content in silicates may well be observed in traces. Therefore, short OH profiles can easily be measured in anhydrous minerals, providing a means to calculate diffusion coefficient of species involved in the uptake of hydrogen in these minerals. Acknowledgment We thank Nathalie Zanier for fruitful discussions on FTIR microspectrometry. We fully acknowledge the technical and engineering support of the NSLS and in particular the help of D. Carlson, J. Gallagher, R. Greene, G. Nintzel, and D. Lynch. We are deeply indebted to John Reffner of Spectra-Tech Inc. for discussions and the NSLS which is supported by the United States Department of Energy under contract DE-AC02-98CH10886. References
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